Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record KN839836.1:
Cluster 1Terpene545832567172
Cluster 2Nrps10476691095708
The following clusters are from record KN839838.1:
Cluster 3Other786062829988
The following clusters are from record KN839840.1:
Cluster 4Terpene71897107841
Cluster 5T1fas719699772535
The following clusters are from record KN839842.1:
Cluster 6Other908876952800
Cluster 7Ubia_cyclase11532031194148
The following clusters are from record KN839843.1:
Cluster 8Terpene2128843002
Cluster 9Terpene10592661082069
The following clusters are from record KN839845.1:
Cluster 10Other488341532483
Cluster 11Terpene537634558847
The following clusters are from record KN839846.1:
Cluster 12Terpene175478196667
Cluster 13Terpene390117411426
Cluster 14Ubia_cyclase567755608829
The following clusters are from record KN839851.1:
Cluster 15Linaridin3689557781
Cluster 16Nrps-t1pks441490493413
Cluster 17Nrps-t1pks620851657611
The following clusters are from record KN839852.1:
Cluster 18Other477606522207
The following clusters are from record KN839853.1:
Cluster 19Terpene236674257821
The following clusters are from record KN839855.1:
Cluster 20Terpene1318334278
Cluster 21Other166410221389
Cluster 22Other378761421852
The following clusters are from record KN839856.1:
Cluster 23Ubia_cyclase283150324199
Cluster 24Ubia_cyclase375124416220
Cluster 25Other400885448886
The following clusters are from record KN839859.1:
Cluster 26Terpene2496246101
The following clusters are from record KN839860.1:
Cluster 27Terpene148590169975
Cluster 28Terpene175955215792
The following clusters are from record KN839868.1:
Cluster 29Nrps-t1pks72591157294
Cluster 30T1pks142274192931
The following clusters are from record KN839875.1:
Cluster 31T1pks133144179573
The following clusters are from record KN839891.1:
Cluster 32Ubia_cyclase36584109924
The following clusters are from record KN839892.1:
Cluster 33Terpene5276774018
The following clusters are from record KN839921.1:
Cluster 34Terpene119422
The following clusters are from record KN839923.1:
Cluster 35Terpene3171843483
The following clusters are from record KN839966.1:
Cluster 36Other120588

Cluster 1 - Terpene

Gene cluster description

Gene Cluster 1. Type = terpene. Location: 545832 - 567172 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 2 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
HYDPIDRAFT_79539
NRPSPredictor2 SVM: N/A
Stachelhaus code: lys
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 2. Type = nrps. Location: 1047669 - 1095708 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 3 - Other

Gene cluster description

Gene Cluster 3. Type = other. Location: 786062 - 829988 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 4 - Terpene

Gene cluster description

Gene Cluster 4. Type = terpene. Location: 71897 - 107841 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 5 - T1fas

Gene cluster description

Gene Cluster 5. Type = t1fas. Location: 719699 - 772535 nt. Click on genes for more information.
Show pHMM detection rules used
t1fas: (bt1fas or ft1fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 6 - Other

Gene cluster description

Gene Cluster 6. Type = other. Location: 908876 - 952800 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 7 - Ubia_cyclase

Gene cluster description

Gene Cluster 7. Type = UbiA_cyclase. Location: 1153203 - 1194148 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 8 - Terpene

Gene cluster description

Gene Cluster 8. Type = terpene. Location: 21288 - 43002 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 9 - Terpene

Gene cluster description

Gene Cluster 9. Type = terpene. Location: 1059266 - 1082069 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 10 - Other

Gene cluster description

Gene Cluster 10. Type = other. Location: 488341 - 532483 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 11 - Terpene

Gene cluster description

Gene Cluster 11. Type = terpene. Location: 537634 - 558847 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 12 - Terpene

Gene cluster description

Gene Cluster 12. Type = terpene. Location: 175478 - 196667 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 13 - Terpene

Gene cluster description

Gene Cluster 13. Type = terpene. Location: 390117 - 411426 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 14 - Ubia_cyclase

Gene cluster description

Gene Cluster 14. Type = UbiA_cyclase. Location: 567755 - 608829 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 15 - Linaridin

Gene cluster description

Gene Cluster 15. Type = linaridin. Location: 36895 - 57781 nt. Click on genes for more information.
Show pHMM detection rules used
linaridin: (cypemycin or cypI)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 16 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
HYDPIDRAFT_134588
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: ser
Minowa: tyr
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 16. Type = nrps-t1pks. Location: 441490 - 493413 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 17 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
HYDPIDRAFT_92628
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: ser
Minowa: tyr
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 17. Type = nrps-t1pks. Location: 620851 - 657611 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 18 - Other

Gene cluster description

Gene Cluster 18. Type = other. Location: 477606 - 522207 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 19 - Terpene

Gene cluster description

Gene Cluster 19. Type = terpene. Location: 236674 - 257821 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 20 - Terpene

Gene cluster description

Gene Cluster 20. Type = terpene. Location: 13183 - 34278 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 21 - Other

Gene cluster description

Gene Cluster 21. Type = other. Location: 166410 - 221389 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 22 - Other

Gene cluster description

Gene Cluster 22. Type = other. Location: 378761 - 421852 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 23 - Ubia_cyclase

Gene cluster description

Gene Cluster 23. Type = UbiA_cyclase. Location: 283150 - 324199 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 24 - Ubia_cyclase

Gene cluster description

Gene Cluster 24. Type = UbiA_cyclase. Location: 375124 - 416220 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 25 - Other

Gene cluster description

Gene Cluster 25. Type = other. Location: 400885 - 448886 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 26 - Terpene

Gene cluster description

Gene Cluster 26. Type = terpene. Location: 24962 - 46101 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 27 - Terpene

Gene cluster description

Gene Cluster 27. Type = terpene. Location: 148590 - 169975 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 28 - Terpene

Gene cluster description

Gene Cluster 28. Type = terpene. Location: 175955 - 215792 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 29 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk) + (pk-nrp)
HYDPIDRAFT_189817
PKS signature: mal
Minowa: mxmal
consensus: pk

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: ser
Minowa: tyr
consensus: nrp

HYDPIDRAFT_189820
PKS signature: mal
Minowa: mmal
consensus: pk

Database cross-links

Gene cluster description

Gene Cluster 29. Type = nrps-t1pks. Location: 72591 - 157294 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 30 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
HYDPIDRAFT_189823
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 30. Type = t1pks. Location: 142274 - 192931 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 31 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
HYDPIDRAFT_99223
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 31. Type = t1pks. Location: 133144 - 179573 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 32 - Ubia_cyclase

Gene cluster description

Gene Cluster 32. Type = UbiA_cyclase. Location: 36584 - 109924 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 33 - Terpene

Gene cluster description

Gene Cluster 33. Type = terpene. Location: 52767 - 74018 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 34 - Terpene

Gene cluster description

Gene Cluster 34. Type = terpene. Location: 1 - 19422 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 35 - Terpene

Gene cluster description

Gene Cluster 35. Type = terpene. Location: 31718 - 43483 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 36 - Other

Gene cluster description

Gene Cluster 36. Type = other. Location: 1 - 20588 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters