Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record JPJR01000044.1:
Cluster 1Siderophore2737043067
The following clusters are from record JPJR01000066.1:
Cluster 2Nrps143025
The following clusters are from record JPJR01000081.1:
Cluster 3T1pks39845847
The following clusters are from record JPJR01000149.1:
Cluster 4Nrps153856
The following clusters are from record JPJR01000177.1:
Cluster 5T1pks133923
The following clusters are from record JPJR01000360.1:
Cluster 6Nrps2193868721
The following clusters are from record JPJR01000396.1:
Cluster 7T1pks135199
The following clusters are from record JPJR01000405.1:
Cluster 8Nrps117694
The following clusters are from record JPJR01000577.1:
Cluster 9Nrps2276973341
The following clusters are from record JPJR01000584.1:
Cluster 10T1pks128217
Cluster 11T1pks1144243657
The following clusters are from record JPJR01000611.1:
Cluster 12Nrps126870
The following clusters are from record JPJR01000652.1:
Cluster 13T1pks358037794
The following clusters are from record JPJR01000839.1:
Cluster 14Nrps119528
The following clusters are from record JPJR01001131.1:
Cluster 15Nrps127108
The following clusters are from record JPJR01001288.1:
Cluster 16T1fas113799
The following clusters are from record JPJR01001320.1:
Cluster 17T1pks128183
The following clusters are from record JPJR01001388.1:
Cluster 18Other409330819
The following clusters are from record JPJR01001414.1:
Cluster 19T1pks-nrps136985
The following clusters are from record JPJR01001424.1:
Cluster 20Other128993
The following clusters are from record JPJR01001528.1:
Cluster 21Nrps-t1pks116371
The following clusters are from record JPJR01001873.1:
Cluster 22T1pks112085
The following clusters are from record JPJR01002160.1:
Cluster 23Terpene116690
The following clusters are from record JPJR01002195.1:
Cluster 24Nrps119247
The following clusters are from record JPJR01002542.1:
Cluster 25Other110129

Cluster 1 - Siderophore

Gene cluster description

Gene Cluster 1. Type = siderophore. Location: 27370 - 43067 nt. Click on genes for more information.
Show pHMM detection rules used
siderophore: (IucA_IucC)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 2 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
O988_00436
NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 2. Type = nrps. Location: 1 - 43025 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 3 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
O988_00532
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 3. Type = t1pks. Location: 398 - 45847 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 4 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(ala) + (nrp-nrp-ala)
O988_00910
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: ser
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophobic-aromatic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: pro
Minowa: ala
consensus: ala

O988_00917
NRPSPredictor2 SVM: ala
Stachelhaus code: leu
Minowa: ala
consensus: ala

Database cross-links

Gene cluster description

Gene Cluster 4. Type = nrps. Location: 1 - 53856 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 5 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
O988_01063
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 5. Type = t1pks. Location: 1 - 33923 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 6 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp)
O988_02217
NRPSPredictor2 SVM: asp,asn,glu,gln,aad
Stachelhaus code: N/A
Minowa: cys
consensus: nrp

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: val
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 6. Type = nrps. Location: 21938 - 68721 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 7 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
O988_02453
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 7. Type = t1pks. Location: 1 - 35199 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 8 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
O988_02546
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: trp
Minowa: phe
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 8. Type = nrps. Location: 1 - 17694 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 9 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp)
O988_03473
NRPSPredictor2 SVM: orn,lys,arg
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: arg
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 9. Type = nrps. Location: 22769 - 73341 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 10 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
O988_03520
PKS signature: mal
Minowa: mxmal
consensus: pk

Gene cluster description

Gene Cluster 10. Type = t1pks. Location: 1 - 28217 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 11 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
O988_03530
PKS signature: mal
Minowa: mxmal
consensus: pk

Gene cluster description

Gene Cluster 11. Type = t1pks. Location: 11442 - 43657 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 12 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (nrp)
O988_03658
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: arg
Minowa: ala
consensus: nrp

O988_03663
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: glu
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 12. Type = nrps. Location: 1 - 26870 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 13 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
O988_03805
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 13. Type = t1pks. Location: 3580 - 37794 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 14 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
O988_04536
NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: arg
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 14. Type = nrps. Location: 1 - 19528 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 15 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pro-nrp-nrp)
O988_05641
NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: ala
consensus: pro

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: cha
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: orn
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 15. Type = nrps. Location: 1 - 27108 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 16 - T1fas

Gene cluster description

Gene Cluster 16. Type = t1fas. Location: 1 - 13799 nt. Click on genes for more information.
Show pHMM detection rules used
t1fas: (bt1fas or ft1fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 17 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
O988_06199
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 17. Type = t1pks. Location: 1 - 28183 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 18 - Other

Gene cluster description

Gene Cluster 18. Type = other. Location: 4093 - 30819 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 19 - T1pks-nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (pk)
O988_06475
PKS signature: mal
Minowa: mmal
consensus: pk

O988_06483
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: N/A
Minowa: dab
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 19. Type = t1pks-nrps. Location: 1 - 36985 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 20 - Other

Gene cluster description

Gene Cluster 20. Type = other. Location: 1 - 28993 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 21 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
O988_06879
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: asp,asn,glu,gln,aad
Stachelhaus code: lys
Minowa: glu
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 21. Type = nrps-t1pks. Location: 1 - 16371 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 22 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
O988_07763
PKS signature: mal
Minowa: mxmal
consensus: pk

Gene cluster description

Gene Cluster 22. Type = t1pks. Location: 1 - 12085 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 23 - Terpene

Gene cluster description

Gene Cluster 23. Type = terpene. Location: 1 - 16690 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 24 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-ala)
O988_08532
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: ser
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: pro
Minowa: ala
consensus: ala

Database cross-links

Gene cluster description

Gene Cluster 24. Type = nrps. Location: 1 - 19247 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 25 - Other

Gene cluster description

Gene Cluster 25. Type = other. Location: 1 - 10129 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters