Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record JOWA01000022.1:
Cluster 1T1pks4772194726
The following clusters are from record JOWA01000077.1:
Cluster 2T1pks-nrps603914676629
Cluster 3T1pks11708811219225
Cluster 4Terpene13377611369913
The following clusters are from record JOWA01000094.1:
Cluster 5Nrps-t1pks436090488949
Cluster 6T1pks480501529014
The following clusters are from record JOWA01000098.1:
Cluster 7Nrps-t1pks61710117622
The following clusters are from record JOWA01000099.1:
Cluster 8T2fas13595941404695
The following clusters are from record JOWA01000102.1:
Cluster 9Nrps66134127429
The following clusters are from record JOWA01000107.1:
Cluster 10Other55209119262
The following clusters are from record JOWA01000109.1:
Cluster 11Terpene101452123807
The following clusters are from record JOWA01000110.1:
Cluster 12T1fas15439381589664
Cluster 13T1pks16083581657193
Cluster 14Terpene23925562414071
The following clusters are from record JOWA01000114.1:
Cluster 15T1pks65252123697
The following clusters are from record JOWA01000116.1:
Cluster 16Nrps-t1pks3577088187
The following clusters are from record JOWA01000118.1:
Cluster 17Other1373657135
Cluster 18Terpene5162690324
The following clusters are from record JOWA01000121.1:
Cluster 19Other844764889854
Cluster 20T1pks14259881476016
Cluster 21Ubia_cyclase-nrps-t1pks16291041698434
Cluster 22T1pks21745512221282
The following clusters are from record JOWA01000132.1:
Cluster 23Terpene10066251027619
Cluster 24Nrps10701391125154
Cluster 25T1pks11528711200789
Cluster 26Other14111401455041
Cluster 27Nrps17602891817064
Cluster 28Nrps20352252092343
The following clusters are from record JOWA01000154.1:
Cluster 29Terpene102244123362
Cluster 30T1pks12549871302131
The following clusters are from record JOWA01000165.1:
Cluster 31Nrps12635191316898
The following clusters are from record JOWA01000176.1:
Cluster 32T3pks12800071321620

Cluster 1 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
SAPIO_CDS0328
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 1. Type = t1pks. Location: 47721 - 94726 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 2 - T1pks-nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk) + (nrp)
SAPIO_CDS1819
PKS signature: N/A
Minowa: mxmal
consensus: pk

SAPIO_CDS1828
NRPSPredictor2 SVM: phe,trp,phg,tyr,bht
Stachelhaus code: N/A
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 2. Type = t1pks-nrps. Location: 603914 - 676629 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 3 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
SAPIO_CDS1984
PKS signature: mmal
Minowa: mxmal
consensus: pk

Gene cluster description

Gene Cluster 3. Type = t1pks. Location: 1170881 - 1219225 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 4 - Terpene

Gene cluster description

Gene Cluster 4. Type = terpene. Location: 1337761 - 1369913 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 5 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
SAPIO_CDS4826
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: gly
Minowa: glu
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 5. Type = nrps-t1pks. Location: 436090 - 488949 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 6 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
SAPIO_CDS4839
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 6. Type = t1pks. Location: 480501 - 529014 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 7 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
SAPIO_CDS5205
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: orn,lys,arg
Stachelhaus code: thr
Minowa: lys
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 7. Type = nrps-t1pks. Location: 61710 - 117622 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 8 - T2fas

Gene cluster description

Gene Cluster 8. Type = t2fas. Location: 1359594 - 1404695 nt. Click on genes for more information.
Show pHMM detection rules used
t2fas: (t2fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 9 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-nrp-ala-nrp-pro)
SAPIO_CDS6317
NRPSPredictor2 SVM: leu
Stachelhaus code: tyr
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: orn
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: leu
Stachelhaus code: val
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: phe
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: ile
Minowa: leu
consensus: nrp

NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: abu
consensus: pro

Database cross-links

Gene cluster description

Gene Cluster 9. Type = nrps. Location: 66134 - 127429 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 10 - Other

Gene cluster description

Gene Cluster 10. Type = other. Location: 55209 - 119262 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 11 - Terpene

Gene cluster description

Gene Cluster 11. Type = terpene. Location: 101452 - 123807 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 12 - T1fas

Gene cluster description

Gene Cluster 12. Type = t1fas. Location: 1543938 - 1589664 nt. Click on genes for more information.
Show pHMM detection rules used
t1fas: (bt1fas or ft1fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 13 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
SAPIO_CDS7388
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 13. Type = t1pks. Location: 1608358 - 1657193 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 14 - Terpene

Gene cluster description

Gene Cluster 14. Type = terpene. Location: 2392556 - 2414071 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 15 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
SAPIO_CDS7973
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 15. Type = t1pks. Location: 65252 - 123697 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 16 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
SAPIO_CDS8012
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: gln
Stachelhaus code: N/A
Minowa: glu
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 16. Type = nrps-t1pks. Location: 35770 - 88187 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 17 - Other

Gene cluster description

Gene Cluster 17. Type = other. Location: 13736 - 57135 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 18 - Terpene

Gene cluster description

Gene Cluster 18. Type = terpene. Location: 51626 - 90324 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 19 - Other

Gene cluster description

Gene Cluster 19. Type = other. Location: 844764 - 889854 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 20 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
SAPIO_CDS8470
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 20. Type = t1pks. Location: 1425988 - 1476016 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 21 - Ubia_cyclase-nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (pk-phe)
SAPIO_CDS8520
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: N/A
Minowa: tyr
consensus: nrp

SAPIO_CDS8531
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: phe
Stachelhaus code: phe
Minowa: tyr
consensus: phe

Database cross-links

Gene cluster description

Gene Cluster 21. Type = UbiA_cyclase-nrps-t1pks. Location: 1629104 - 1698434 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 22 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
SAPIO_CDS8658
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 22. Type = t1pks. Location: 2174551 - 2221282 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 23 - Terpene

Gene cluster description

Gene Cluster 23. Type = terpene. Location: 1006625 - 1027619 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 24 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(ala-nrp-nrp)
SAPIO_CDS9032
NRPSPredictor2 SVM: N/A
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: pro
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 24. Type = nrps. Location: 1070139 - 1125154 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 25 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
SAPIO_CDS9048
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 25. Type = t1pks. Location: 1152871 - 1200789 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 26 - Other

Gene cluster description

Gene Cluster 26. Type = other. Location: 1411140 - 1455041 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 27 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-nrp-nrp-nrp)
SAPIO_CDS9221
NRPSPredictor2 SVM: hydrophobic-aromatic
Stachelhaus code: gly
Minowa: lys
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: vol
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: glu,gln
Stachelhaus code: trp
Minowa: cys
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 27. Type = nrps. Location: 1760289 - 1817064 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 28 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-nrp-nrp)
SAPIO_CDS9291
NRPSPredictor2 SVM: N/A
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: apa
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: pro,pip
Stachelhaus code: orn
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: arg
Minowa: aeo
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 28. Type = nrps. Location: 2035225 - 2092343 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 29 - Terpene

Gene cluster description

Gene Cluster 29. Type = terpene. Location: 102244 - 123362 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 30 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
SAPIO_CDS10114
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 30. Type = t1pks. Location: 1254987 - 1302131 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 31 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(ala-leu-nrp-ile)
SAPIO_CDS10511
NRPSPredictor2 SVM: ala
Stachelhaus code: ala
Minowa: pro
consensus: ala

NRPSPredictor2 SVM: leu
Stachelhaus code: leu
Minowa: ala
consensus: leu

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: phe
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ile
Stachelhaus code: ile
Minowa: bmt
consensus: ile

Database cross-links

Gene cluster description

Gene Cluster 31. Type = nrps. Location: 1263519 - 1316898 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 32 - T3pks

Gene cluster description

Gene Cluster 32. Type = t3pks. Location: 1280007 - 1321620 nt. Click on genes for more information.
Show pHMM detection rules used
t3pks: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters