Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record KB445569.1:
Cluster 1Other713042757946
Cluster 2T1pks12906061337180
Cluster 3Terpene36548493675785
Cluster 4T1pks39663744042715
The following clusters are from record KB445570.1:
Cluster 5Other14582071503015
Cluster 6Terpene20539882076282
The following clusters are from record KB445571.1:
Cluster 7T1pks3579283503
Cluster 8T1pks16624731710299
Cluster 9Nrps22540012316105
The following clusters are from record KB445572.1:
Cluster 10T1pks75834121360
Cluster 11Terpene12325631253887
The following clusters are from record KB445573.1:
Cluster 12Nrps13584401417815
Cluster 13Hglks-nrps18904361960691
The following clusters are from record KB445574.1:
Cluster 14T2fas3704278670
Cluster 15Nrps449326504802
Cluster 16T1pks-terpene812345874306
Cluster 17T1pks925421983341
Cluster 18T1pks12236271270745
The following clusters are from record KB445575.1:
Cluster 19Terpene12829691305288
The following clusters are from record KB445576.1:
Cluster 20Other229479273327
Cluster 21Nrps816996868041
The following clusters are from record KB445577.1:
Cluster 22T1pks736550784842
Cluster 23Other797942841187
The following clusters are from record KB445578.1:
Cluster 24Terpene10015281023151
Cluster 25Terpene14239561445869
Cluster 26Nrps17145451757103
Cluster 27T1pks18376441884735
Cluster 28Terpene29335842954986
Cluster 29Terpene-nrps32515923295629
Cluster 30T1pks33131843365117
The following clusters are from record KB445579.1:
Cluster 31T1fas62654108340
Cluster 32T1pks668541716755
Cluster 33T1pks13515091395835
The following clusters are from record KB445580.1:
Cluster 34Terpene89632111023
Cluster 35T1pks-ubia_cyclase120023169392
Cluster 36Other604540648269
Cluster 37T1pks761766809746
The following clusters are from record KB445581.1:
Cluster 38Terpene213079234501
Cluster 39Terpene261863283318
Cluster 40Nrps9775961030465
Cluster 41Nrps15048061549470
The following clusters are from record KB445582.1:
Cluster 42Nrps-t1pks9792441043184
The following clusters are from record KB445583.1:
Cluster 43Other132232
Cluster 44T3pks179541220913
The following clusters are from record KB445584.1:
Cluster 45T1pks-hglks577375619989
Cluster 46Other626733669958
The following clusters are from record KB445587.1:
Cluster 47T2fas687271723385
The following clusters are from record KB445588.1:
Cluster 48T1pks295343342809
The following clusters are from record KB445589.1:
Cluster 49Nrps129004185126
The following clusters are from record KB445590.1:
Cluster 50T1pks61024107486
The following clusters are from record KB445598.1:
Cluster 51Lantipeptide-t1pks1879590134
The following clusters are from record KB445604.1:
Cluster 52Other114293
The following clusters are from record KB445616.1:
Cluster 53T1pks134009
The following clusters are from record KB445633.1:
Cluster 54Hglks261733856

Cluster 1 - Other

Gene cluster description

Gene Cluster 1. Type = other. Location: 713042 - 757946 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 2 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
COCHEDRAFT_30478
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 2. Type = t1pks. Location: 1290606 - 1337180 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 3 - Terpene

Gene cluster description

Gene Cluster 3. Type = terpene. Location: 3654849 - 3675785 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 4 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(gly-mal) + (pk)
COCHEDRAFT_108173
PKS signature: mal
Minowa: mmal
consensus: pk

COCHEDRAFT_1209664
NRPSPredictor2 SVM: gly
Stachelhaus code: gly
Minowa: gly
consensus: gly

PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 4. Type = t1pks. Location: 3966374 - 4042715 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 5 - Other

Gene cluster description

Gene Cluster 5. Type = other. Location: 1458207 - 1503015 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 6 - Terpene

Gene cluster description

Gene Cluster 6. Type = terpene. Location: 2053988 - 2076282 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 7 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
COCHEDRAFT_105287
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 7. Type = t1pks. Location: 35792 - 83503 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 8 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_1168707
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 8. Type = t1pks. Location: 1662473 - 1710299 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 9 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-nrp-nrp)
COCHEDRAFT_1091637
NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: orn
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: leu
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: tyr
Minowa: lys
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: ile
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 9. Type = nrps. Location: 2254001 - 2316105 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 10 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
COCHEDRAFT_81477
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 10. Type = t1pks. Location: 75834 - 121360 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 11 - Terpene

Gene cluster description

Gene Cluster 11. Type = terpene. Location: 1232563 - 1253887 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 12 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (nrp)
COCHEDRAFT_1223335
NRPSPredictor2 SVM: N/A
Stachelhaus code: N/A
Minowa: glu
consensus: nrp

COCHEDRAFT_128080
NRPSPredictor2 SVM: hydrophobic-aromatic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 12. Type = nrps. Location: 1358440 - 1417815 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 13 - Hglks-nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp)
COCHEDRAFT_1095362
NRPSPredictor2 SVM: asp,asn,glu,gln,aad
Stachelhaus code: ahp
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: pro
Stachelhaus code: end
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 13. Type = hglks-nrps. Location: 1890436 - 1960691 nt. Click on genes for more information.
Show pHMM detection rules used
hglks: (hglE or hglD)
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 14 - T2fas

Gene cluster description

Gene Cluster 14. Type = t2fas. Location: 37042 - 78670 nt. Click on genes for more information.
Show pHMM detection rules used
t2fas: (t2fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 15 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-val-nrp-leu)
COCHEDRAFT_128098
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: val
Minowa: val
consensus: val

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: phe
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: leu
consensus: leu

Database cross-links

Gene cluster description

Gene Cluster 15. Type = nrps. Location: 449326 - 504802 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 16 - T1pks-terpene

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
COCHEDRAFT_96868
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 16. Type = t1pks-terpene. Location: 812345 - 874306 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 17 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk) + (mal)
COCHEDRAFT_1098212
PKS signature: mal
Minowa: mmal
consensus: pk

COCHEDRAFT_1029307
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 17. Type = t1pks. Location: 925421 - 983341 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 18 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_33896
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 18. Type = t1pks. Location: 1223627 - 1270745 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 19 - Terpene

Gene cluster description

Gene Cluster 19. Type = terpene. Location: 1282969 - 1305288 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 20 - Other

Gene cluster description

Gene Cluster 20. Type = other. Location: 229479 - 273327 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 21 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-leu-nrp)
COCHEDRAFT_1101207
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: phe
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: leu
consensus: leu

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 21. Type = nrps. Location: 816996 - 868041 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 22 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_1103337
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 22. Type = t1pks. Location: 736550 - 784842 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 23 - Other

Gene cluster description

Gene Cluster 23. Type = other. Location: 797942 - 841187 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 24 - Terpene

Gene cluster description

Gene Cluster 24. Type = terpene. Location: 1001528 - 1023151 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 25 - Terpene

Gene cluster description

Gene Cluster 25. Type = terpene. Location: 1423956 - 1445869 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 26 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
COCHEDRAFT_1215193
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: N/A
Minowa: aeo
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 26. Type = nrps. Location: 1714545 - 1757103 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 27 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_1104189
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 27. Type = t1pks. Location: 1837644 - 1884735 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 28 - Terpene

Gene cluster description

Gene Cluster 28. Type = terpene. Location: 2933584 - 2954986 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 29 - Terpene-nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
COCHEDRAFT_1104551
NRPSPredictor2 SVM: hydrophobic-aromatic
Stachelhaus code: gln
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 29. Type = terpene-nrps. Location: 3251592 - 3295629 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 30 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_1105179
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 30. Type = t1pks. Location: 3313184 - 3365117 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 31 - T1fas

Gene cluster description

Gene Cluster 31. Type = t1fas. Location: 62654 - 108340 nt. Click on genes for more information.
Show pHMM detection rules used
t1fas: (bt1fas or ft1fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 32 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_28817
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 32. Type = t1pks. Location: 668541 - 716755 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 33 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
COCHEDRAFT_1108855
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 33. Type = t1pks. Location: 1351509 - 1395835 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 34 - Terpene

Gene cluster description

Gene Cluster 34. Type = terpene. Location: 89632 - 111023 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 35 - T1pks-ubia_cyclase

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mmal)
COCHEDRAFT_1216295
PKS signature: mmal
Minowa: mmal
consensus: mmal

Gene cluster description

Gene Cluster 35. Type = t1pks-UbiA_cyclase. Location: 120023 - 169392 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 36 - Other

Gene cluster description

Gene Cluster 36. Type = other. Location: 604540 - 648269 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 37 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_67271
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 37. Type = t1pks. Location: 761766 - 809746 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 38 - Terpene

Gene cluster description

Gene Cluster 38. Type = terpene. Location: 213079 - 234501 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 39 - Terpene

Gene cluster description

Gene Cluster 39. Type = terpene. Location: 261863 - 283318 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 40 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (nrp-nrp)
COCHEDRAFT_1217163
NRPSPredictor2 SVM: asp,asn,glu,gln,aad
Stachelhaus code: N/A
Minowa: lys
consensus: nrp

COCHEDRAFT_1227314
NRPSPredictor2 SVM: leu
Stachelhaus code: ile
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: ser
Minowa: pro
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 40. Type = nrps. Location: 977596 - 1030465 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 41 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp)
COCHEDRAFT_1159473
NRPSPredictor2 SVM: phe
Stachelhaus code: pro
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: N/A
Minowa: aeo
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 41. Type = nrps. Location: 1504806 - 1549470 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 42 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk) + (nrp)
COCHEDRAFT_1113215
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: gly
Minowa: lys
consensus: nrp

COCHEDRAFT_1112706
PKS signature: mal
Minowa: mmal
consensus: pk

Database cross-links

Gene cluster description

Gene Cluster 42. Type = nrps-t1pks. Location: 979244 - 1043184 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 43 - Other

Gene cluster description

Gene Cluster 43. Type = other. Location: 1 - 32232 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 44 - T3pks

Gene cluster description

Gene Cluster 44. Type = t3pks. Location: 179541 - 220913 nt. Click on genes for more information.
Show pHMM detection rules used
t3pks: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 45 - T1pks-hglks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:

Gene cluster description

Gene Cluster 45. Type = t1pks-hglks. Location: 577375 - 619989 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))
hglks: (hglE or hglD)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 46 - Other

Gene cluster description

Gene Cluster 46. Type = other. Location: 626733 - 669958 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 47 - T2fas

Gene cluster description

Gene Cluster 47. Type = t2fas. Location: 687271 - 723385 nt. Click on genes for more information.
Show pHMM detection rules used
t2fas: (t2fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 48 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_1118456
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 48. Type = t1pks. Location: 295343 - 342809 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 49 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(ala-nrp-nrp-nrp)
COCHEDRAFT_128084
NRPSPredictor2 SVM: N/A
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: pro
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: trp
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 49. Type = nrps. Location: 129004 - 185126 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 50 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
COCHEDRAFT_77059
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 50. Type = t1pks. Location: 61024 - 107486 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 51 - Lantipeptide-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_96669
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 51. Type = lantipeptide-t1pks. Location: 18795 - 90134 nt. Click on genes for more information.
Show pHMM detection rules used
lantipeptide: ((Lant_dehyd_N & Lant_dehyd_C) or cluster(LANC_like,Flavoprotein) or cluster(LANC_like,Trp_halogenase) or cluster(LANC_like,p450) or (LANC_like & Pkinase) or (LANC_like & DUF4135) or cluster(LANC_like,Lant_dehyd_N) or cluster(LANC_like,Lant_dehyd_C) or cluster(LANC_like,adh_short) or cluster(LANC_like,adh_short_C2) or TIGR03731 or Antimicr18 or Gallidermin or L_biotic_A or TIGR03731 or leader_d or leader_eh or leader_abc or mature_d or mature_ab or mature_a or mature_b or mature_ha or mature_h_beta or lacticin_l or lacticin_mat or LD_lanti_pre or strep_PEQAXS)
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

No core peptides found.

Homologous gene clusters

Cluster 52 - Other

Gene cluster description

Gene Cluster 52. Type = other. Location: 1 - 14293 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 53 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
COCHEDRAFT_1229323
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 53. Type = t1pks. Location: 1 - 34009 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 54 - Hglks

Gene cluster description

Gene Cluster 54. Type = hglks. Location: 2617 - 33856 nt. Click on genes for more information.
Show pHMM detection rules used
hglks: (hglE or hglD)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters