Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record JH717967.1:
Cluster 1Terpene12093251232008
The following clusters are from record JH717968.1:
Cluster 2T1pks589379636842
Cluster 3Ubia_cyclase11441561185092
Cluster 4Terpene27925332813726
Cluster 5T1fas32468773299468
The following clusters are from record JH717969.1:
Cluster 6T1pks682708731325
Cluster 7Ubia_cyclase827094889226
Cluster 8Ubia_cyclase16222541663265
Cluster 9Nrps19729102020888
The following clusters are from record JH717970.1:
Cluster 10Terpene653469674771
Cluster 11Terpene796370817676
Cluster 12Terpene29380542959352
Cluster 13Terpene30195293040830
Cluster 14Terpene30603303081628
The following clusters are from record JH717971.1:
Cluster 15Terpene30361863057316
Cluster 16Ubia_cyclase-terpene30497193125720
Cluster 17Terpene32163203237434
The following clusters are from record JH717973.1:
Cluster 18Terpene17272031748538
The following clusters are from record JH717974.1:
Cluster 19Terpene846849868012
The following clusters are from record JH717976.1:
Cluster 20Terpene12492151273116
Cluster 21Terpene12826331303927
Cluster 22T1pks22558592303365
The following clusters are from record JH717977.1:
Cluster 23T1pks136330185915
Cluster 24Other369655414610
Cluster 25Terpene591128613079
Cluster 26Other10421861085531
Cluster 27Other10810571125204
The following clusters are from record JH717979.1:
Cluster 28Other4503889144
The following clusters are from record JH717980.1:
Cluster 29Terpene196023256
The following clusters are from record JH717983.1:
Cluster 30Terpene295686316935
The following clusters are from record JH717984.1:
Cluster 31Terpene818110839288
Cluster 32Terpene877693898869

Cluster 1 - Terpene

Gene cluster description

Gene Cluster 1. Type = terpene. Location: 1209325 - 1232008 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 2 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
FOMMEDRAFT_144436
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 2. Type = t1pks. Location: 589379 - 636842 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 3 - Ubia_cyclase

Gene cluster description

Gene Cluster 3. Type = UbiA_cyclase. Location: 1144156 - 1185092 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 4 - Terpene

Gene cluster description

Gene Cluster 4. Type = terpene. Location: 2792533 - 2813726 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 5 - T1fas

Gene cluster description

Gene Cluster 5. Type = t1fas. Location: 3246877 - 3299468 nt. Click on genes for more information.
Show pHMM detection rules used
t1fas: (bt1fas or ft1fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 6 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-mal)
FOMMEDRAFT_165792
NRPSPredictor2 SVM: N/A
Stachelhaus code: cys
Minowa: leu
consensus: nrp

PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 6. Type = t1pks. Location: 682708 - 731325 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 7 - Ubia_cyclase

Gene cluster description

Gene Cluster 7. Type = UbiA_cyclase. Location: 827094 - 889226 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 8 - Ubia_cyclase

Gene cluster description

Gene Cluster 8. Type = UbiA_cyclase. Location: 1622254 - 1663265 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 9 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
FOMMEDRAFT_119062
NRPSPredictor2 SVM: N/A
Stachelhaus code: lys
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 9. Type = nrps. Location: 1972910 - 2020888 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 10 - Terpene

Gene cluster description

Gene Cluster 10. Type = terpene. Location: 653469 - 674771 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 11 - Terpene

Gene cluster description

Gene Cluster 11. Type = terpene. Location: 796370 - 817676 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 12 - Terpene

Gene cluster description

Gene Cluster 12. Type = terpene. Location: 2938054 - 2959352 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 13 - Terpene

Gene cluster description

Gene Cluster 13. Type = terpene. Location: 3019529 - 3040830 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 14 - Terpene

Gene cluster description

Gene Cluster 14. Type = terpene. Location: 3060330 - 3081628 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 15 - Terpene

Gene cluster description

Gene Cluster 15. Type = terpene. Location: 3036186 - 3057316 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 16 - Ubia_cyclase-terpene

Gene cluster description

Gene Cluster 16. Type = UbiA_cyclase-terpene. Location: 3049719 - 3125720 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 17 - Terpene

Gene cluster description

Gene Cluster 17. Type = terpene. Location: 3216320 - 3237434 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 18 - Terpene

Gene cluster description

Gene Cluster 18. Type = terpene. Location: 1727203 - 1748538 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 19 - Terpene

Gene cluster description

Gene Cluster 19. Type = terpene. Location: 846849 - 868012 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 20 - Terpene

Gene cluster description

Gene Cluster 20. Type = terpene. Location: 1249215 - 1273116 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 21 - Terpene

Gene cluster description

Gene Cluster 21. Type = terpene. Location: 1282633 - 1303927 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 22 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mmal)
FOMMEDRAFT_112582
PKS signature: mmal
Minowa: mmal
consensus: mmal

Gene cluster description

Gene Cluster 22. Type = t1pks. Location: 2255859 - 2303365 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 23 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk) + (nrp)
FOMMEDRAFT_112677
PKS signature: N/A
Minowa: mal
consensus: pk

FOMMEDRAFT_170261
NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: tyr
Minowa: pip
consensus: nrp

Gene cluster description

Gene Cluster 23. Type = t1pks. Location: 136330 - 185915 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 24 - Other

Gene cluster description

Gene Cluster 24. Type = other. Location: 369655 - 414610 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 25 - Terpene

Gene cluster description

Gene Cluster 25. Type = terpene. Location: 591128 - 613079 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 26 - Other

Gene cluster description

Gene Cluster 26. Type = other. Location: 1042186 - 1085531 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 27 - Other

Gene cluster description

Gene Cluster 27. Type = other. Location: 1081057 - 1125204 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 28 - Other

Gene cluster description

Gene Cluster 28. Type = other. Location: 45038 - 89144 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 29 - Terpene

Gene cluster description

Gene Cluster 29. Type = terpene. Location: 1960 - 23256 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

No significant ClusterBlast hits found.

Cluster 30 - Terpene

Gene cluster description

Gene Cluster 30. Type = terpene. Location: 295686 - 316935 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 31 - Terpene

Gene cluster description

Gene Cluster 31. Type = terpene. Location: 818110 - 839288 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 32 - Terpene

Gene cluster description

Gene Cluster 32. Type = terpene. Location: 877693 - 898869 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters