Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record ABDF02000092.1:
Cluster 1Other248628292479
Cluster 2Terpene18267691859583
The following clusters are from record ABDF02000091.1:
Cluster 3Other136465
Cluster 4T1pks17158821774107
The following clusters are from record ABDF02000090.1:
Cluster 5T2fas912807954254
Cluster 6Other9737151017712
Cluster 7Terpene13959011416899
The following clusters are from record ABDF02000089.1:
Cluster 8T1pks112298159956
Cluster 9T1pks834721882315
Cluster 10T1pks10699221115282
The following clusters are from record ABDF02000088.1:
Cluster 11Other12318211275210
The following clusters are from record ABDF02000086.1:
Cluster 12Terpene217719239205
Cluster 13Ubia_cyclase353839394753
Cluster 14T1pks519439566836
Cluster 15Nrps583037643982
Cluster 16T1pks11517001199993
The following clusters are from record ABDF02000085.1:
Cluster 17Nrps58183107308
Cluster 18Other499491542571
Cluster 19Nrps813098915907
The following clusters are from record ABDF02000083.1:
Cluster 20Ubia_cyclase2657967403
The following clusters are from record ABDF02000082.1:
Cluster 21Nrps776010825456
The following clusters are from record ABDF02000081.1:
Cluster 22T1pks163971212143
Cluster 23Nrps607285653986
Cluster 24Nrps-t1pks707939760017
The following clusters are from record ABDF02000080.1:
Cluster 25T1fas236131281860
Cluster 26Nrps491103555729
The following clusters are from record ABDF02000079.1:
Cluster 27Nrps-t1pks116491168646
The following clusters are from record ABDF02000078.1:
Cluster 28T1pks-nrps19815104786
Cluster 29T1pks353068399901
The following clusters are from record ABDF02000077.1:
Cluster 30Terpene195024216487
The following clusters are from record ABDF02000076.1:
Cluster 31Other138038181883
The following clusters are from record ABDF02000075.1:
Cluster 32Nrps166255228190
The following clusters are from record ABDF02000074.1:
Cluster 33Nrps274648306882
The following clusters are from record ABDF02000069.1:
Cluster 34Nrps3080676303
Cluster 35Other95608138905
The following clusters are from record ABDF02000068.1:
Cluster 36Nrps2370680495
The following clusters are from record ABDF02000066.1:
Cluster 37Nrps138331
The following clusters are from record ABDF02000065.1:
Cluster 38Nrps-terpene698856867
The following clusters are from record ABDF02000064.1:
Cluster 39Nrps2483889978
The following clusters are from record ABDF02000061.1:
Cluster 40Nrps138675
The following clusters are from record ABDF02000060.1:
Cluster 41Terpene4992963632
The following clusters are from record ABDF02000058.1:
Cluster 42T1pks134348
The following clusters are from record ABDF02000052.1:
Cluster 43T1pks130761
The following clusters are from record ABDF02000050.1:
Cluster 44T1pks133933
The following clusters are from record ABDF02000047.1:
Cluster 45Nrps60730121
The following clusters are from record ABDF02000006.1:
Cluster 46T1pks22669882313963
Cluster 47Terpene27154872736891
Cluster 48T1pks-nrps29276333002836
Cluster 49Nrps-t1pks29877753040453
Cluster 50T1pks31227613172497
The following clusters are from record ABDF02000005.1:
Cluster 51Nrps505121548557
Cluster 52Nrps-t1pks18108301900925
Cluster 53Other27601872803365
The following clusters are from record ABDF02000003.1:
Cluster 54Terpene9981481019729
Cluster 55Terpene13615391382861
Cluster 56Other22136502256950
Cluster 57Ubia_cyclase-nrps24974862573890
The following clusters are from record ABDF02000002.1:
Cluster 58T1pks583128631750
The following clusters are from record ABDF02000001.1:
Cluster 59Nrps-t1pks141497
Cluster 60Terpene114184135656
Cluster 61Other225005268230
Cluster 62Nrps337960392711
Cluster 63Other23353602379137

Cluster 1 - Other

Gene cluster description

Gene Cluster 1. Type = other. Location: 248628 - 292479 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 2 - Terpene

Gene cluster description

Gene Cluster 2. Type = terpene. Location: 1826769 - 1859583 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 3 - Other

Gene cluster description

Gene Cluster 3. Type = other. Location: 1 - 36465 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 4 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal) + (pk)
TRIVIDRAFT_39352
PKS signature: mal
Minowa: mal
consensus: mal

TRIVIDRAFT_64883
PKS signature: mal
Minowa: mxmal
consensus: pk

Gene cluster description

Gene Cluster 4. Type = t1pks. Location: 1715882 - 1774107 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 5 - T2fas

Gene cluster description

Gene Cluster 5. Type = t2fas. Location: 912807 - 954254 nt. Click on genes for more information.
Show pHMM detection rules used
t2fas: (t2fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 6 - Other

Gene cluster description

Gene Cluster 6. Type = other. Location: 973715 - 1017712 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 7 - Terpene

Gene cluster description

Gene Cluster 7. Type = terpene. Location: 1395901 - 1416899 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 8 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
TRIVIDRAFT_161465
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 8. Type = t1pks. Location: 112298 - 159956 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 9 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (pk)
TRIVIDRAFT_195155
NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: val
Minowa: glu
consensus: nrp

TRIVIDRAFT_161339
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 9. Type = t1pks. Location: 834721 - 882315 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 10 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
TRIVIDRAFT_20101
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 10. Type = t1pks. Location: 1069922 - 1115282 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 11 - Other

Gene cluster description

Gene Cluster 11. Type = other. Location: 1231821 - 1275210 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 12 - Terpene

Gene cluster description

Gene Cluster 12. Type = terpene. Location: 217719 - 239205 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 13 - Ubia_cyclase

Gene cluster description

Gene Cluster 13. Type = UbiA_cyclase. Location: 353839 - 394753 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 14 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mmal)
TRIVIDRAFT_47407
PKS signature: mmal
Minowa: mmal
consensus: mmal

Gene cluster description

Gene Cluster 14. Type = t1pks. Location: 519439 - 566836 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 15 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-leu-nrp-nrp-nrp)
TRIVIDRAFT_68467
NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: gln
Minowa: leu
consensus: nrp

NRPSPredictor2 SVM: leu
Stachelhaus code: leu
Minowa: val
consensus: leu

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: orn
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: abu
Minowa: val
consensus: nrp

NRPSPredictor2 SVM: asp,asn,glu,gln,aad
Stachelhaus code: arg
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 15. Type = nrps. Location: 583037 - 643982 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 16 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
TRIVIDRAFT_51044
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 16. Type = t1pks. Location: 1151700 - 1199993 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 17 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (nrp)
TRIVIDRAFT_44273
NRPSPredictor2 SVM: N/A
Stachelhaus code: gly
Minowa: ala
consensus: nrp

TRIVIDRAFT_44194
NRPSPredictor2 SVM: N/A
Stachelhaus code: N/A
Minowa: glu
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 17. Type = nrps. Location: 58183 - 107308 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 18 - Other

Gene cluster description

Gene Cluster 18. Type = other. Location: 499491 - 542571 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 19 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp-nrp-ala-nrp-nrp-gln-nrp-ala-nrp-ser-leu-nrp-pro-nrp-ala-ala-gln-nrp)
TRIVIDRAFT_66940
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: iva
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: val
Stachelhaus code: met
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: iva
Stachelhaus code: val
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: gln
Stachelhaus code: gln
Minowa: ala
consensus: gln

NRPSPredictor2 SVM: iva
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: ala
Minowa: aeo
consensus: ala

NRPSPredictor2 SVM: iva
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ser
Stachelhaus code: ser
Minowa: ala
consensus: ser

NRPSPredictor2 SVM: leu
Stachelhaus code: leu
Minowa: tyr
consensus: leu

NRPSPredictor2 SVM: iva
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: ala
consensus: pro

NRPSPredictor2 SVM: val
Stachelhaus code: leu
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: iva
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: iva
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: gln
Stachelhaus code: gln
Minowa: ala
consensus: gln

NRPSPredictor2 SVM: pro
Stachelhaus code: vol
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 19. Type = nrps. Location: 813098 - 915907 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 20 - Ubia_cyclase

Gene cluster description

Gene Cluster 20. Type = UbiA_cyclase. Location: 26579 - 67403 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 21 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-leu)
TRIVIDRAFT_46961
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: hyv
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: leu
consensus: leu

Database cross-links

Gene cluster description

Gene Cluster 21. Type = nrps. Location: 776010 - 825456 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 22 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
TRIVIDRAFT_47828
PKS signature: mal
Minowa: mxmal
consensus: pk

Gene cluster description

Gene Cluster 22. Type = t1pks. Location: 163971 - 212143 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 23 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp)
TRIVIDRAFT_224342
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: leu
Minowa: val
consensus: nrp

NRPSPredictor2 SVM: gly,ala
Stachelhaus code: pro
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 23. Type = nrps. Location: 607285 - 653986 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 24 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
TRIVIDRAFT_47905
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: ala
Minowa: leu
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 24. Type = nrps-t1pks. Location: 707939 - 760017 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 25 - T1fas

Gene cluster description

Gene Cluster 25. Type = t1fas. Location: 236131 - 281860 nt. Click on genes for more information.
Show pHMM detection rules used
t1fas: (bt1fas or ft1fas)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 26 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-ala-nrp-nrp-nrp)
TRIVIDRAFT_68823
NRPSPredictor2 SVM: hydrophobic-aromatic
Stachelhaus code: bht
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: pro,pip
Stachelhaus code: orn
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: ahp
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: pro,pip
Stachelhaus code: asn
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: orn
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: orn
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 26. Type = nrps. Location: 491103 - 555729 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 27 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-nrp)
TRIVIDRAFT_192717
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: leu
Stachelhaus code: trp
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 27. Type = nrps-t1pks. Location: 116491 - 168646 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 28 - T1pks-nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal) + (nrp-nrp-nrp-nrp-nrp-nrp-nrp)
TRIVIDRAFT_49800
PKS signature: mal
Minowa: mal
consensus: mal

TRIVIDRAFT_69362
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: ser
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: phe,trp,phg,tyr,bht
Stachelhaus code: bht
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: iva
Stachelhaus code: phe
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: ser
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 28. Type = t1pks-nrps. Location: 19815 - 104786 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 29 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
TRIVIDRAFT_209609
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 29. Type = t1pks. Location: 353068 - 399901 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 30 - Terpene

Gene cluster description

Gene Cluster 30. Type = terpene. Location: 195024 - 216487 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 31 - Other

Gene cluster description

Gene Cluster 31. Type = other. Location: 138038 - 181883 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 32 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (nrp) + (ala)
TRIVIDRAFT_202307
NRPSPredictor2 SVM: leu
Stachelhaus code: ala-d
Minowa: ala
consensus: nrp

TRIVIDRAFT_51630
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: ser
Minowa: orn
consensus: nrp

TRIVIDRAFT_223369
NRPSPredictor2 SVM: ala
Stachelhaus code: ala
Minowa: ala
consensus: ala

Database cross-links

Gene cluster description

Gene Cluster 32. Type = nrps. Location: 166255 - 228190 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 33 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
TRIVIDRAFT_192365
NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 33. Type = nrps. Location: 274648 - 306882 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 34 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
TRIVIDRAFT_152250
NRPSPredictor2 SVM: phe,trp
Stachelhaus code: arg
Minowa: glu
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 34. Type = nrps. Location: 30806 - 76303 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 35 - Other

Gene cluster description

Gene Cluster 35. Type = other. Location: 95608 - 138905 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 36 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-ala-leu-nrp)
TRIVIDRAFT_52861
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: pro
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: leu
Stachelhaus code: abu
Minowa: leu
consensus: leu

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: pro
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 36. Type = nrps. Location: 23706 - 80495 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 37 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
TRIVIDRAFT_52933
NRPSPredictor2 SVM: asp,asn,glu,gln,aad
Stachelhaus code: N/A
Minowa: orn
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 37. Type = nrps. Location: 1 - 38331 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 38 - Nrps-terpene

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp)
TRIVIDRAFT_70742
NRPSPredictor2 SVM: lys
Stachelhaus code: gln
Minowa: tyr
consensus: nrp

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: gly
Minowa: val
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 38. Type = nrps-terpene. Location: 6988 - 56867 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 39 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp-nrp-nrp-nrp-ala)
TRIVIDRAFT_70770
NRPSPredictor2 SVM: pro
Stachelhaus code: arg
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: val
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: val
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: asp,asn,glu,gln,aad
Stachelhaus code: lys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: ala
Minowa: ala
consensus: ala

Database cross-links

Gene cluster description

Gene Cluster 39. Type = nrps. Location: 24838 - 89978 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 40 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-ala-nrp-nrp)
TRIVIDRAFT_70819
NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: N/A
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: ala
Stachelhaus code: cys
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: lys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: orn
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 40. Type = nrps. Location: 1 - 38675 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 41 - Terpene

Gene cluster description

Gene Cluster 41. Type = terpene. Location: 49929 - 63632 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 42 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
TRIVIDRAFT_151590
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 42. Type = t1pks. Location: 1 - 34348 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 43 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
TRIVIDRAFT_53518
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 43. Type = t1pks. Location: 1 - 30761 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 44 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
TRIVIDRAFT_53633
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 44. Type = t1pks. Location: 1 - 33933 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 45 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp)
TRIVIDRAFT_78708
NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: leu
Minowa: lys
consensus: nrp

NRPSPredictor2 SVM: phe,trp,phg,tyr,bht
Stachelhaus code: phe
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 45. Type = nrps. Location: 607 - 30121 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 46 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
TRIVIDRAFT_53926
PKS signature: mal
Minowa: mmal
consensus: pk

Gene cluster description

Gene Cluster 46. Type = t1pks. Location: 2266988 - 2313963 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 47 - Terpene

Gene cluster description

Gene Cluster 47. Type = terpene. Location: 2715487 - 2736891 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 48 - T1pks-nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal) + (nrp) + (pk-nrp)
TRIVIDRAFT_222260
PKS signature: mal
Minowa: mal
consensus: mal

TRIVIDRAFT_60181
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: N/A
Minowa: leu
consensus: nrp

TRIVIDRAFT_28610
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: cys
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 48. Type = t1pks-nrps. Location: 2927633 - 3002836 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 49 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mmal-nrp)
TRIVIDRAFT_191605
PKS signature: mmal
Minowa: mmal
consensus: mmal

NRPSPredictor2 SVM: leu
Stachelhaus code: trp
Minowa: tyr
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 49. Type = nrps-t1pks. Location: 2987775 - 3040453 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 50 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk)
TRIVIDRAFT_149212
PKS signature: mal
Minowa: mxmal
consensus: pk

Gene cluster description

Gene Cluster 50. Type = t1pks. Location: 3122761 - 3172497 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 51 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp)
TRIVIDRAFT_220662
NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 51. Type = nrps. Location: 505121 - 548557 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 52 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-ala-ala-leu-nrp-pro-nrp-nrp-nrp-pro-nrp-nrp-nrp-pro-nrp)
TRIVIDRAFT_10003
PKS signature: mal
Minowa: mmal
consensus: pk

NRPSPredictor2 SVM: iva
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: ala
Stachelhaus code: gly
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: leu
Stachelhaus code: leu
Minowa: ala
consensus: leu

NRPSPredictor2 SVM: iva
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: ala
consensus: pro

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: pro
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: val
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: iva
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: ala
consensus: pro

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: aeo
consensus: nrp

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: iva
Stachelhaus code: cys
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: ala
consensus: pro

NRPSPredictor2 SVM: val,leu,ile,abu,iva
Stachelhaus code: phe
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 52. Type = nrps-t1pks. Location: 1810830 - 1900925 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 53 - Other

Gene cluster description

Gene Cluster 53. Type = other. Location: 2760187 - 2803365 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 54 - Terpene

Gene cluster description

Gene Cluster 54. Type = terpene. Location: 998148 - 1019729 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 55 - Terpene

Gene cluster description

Gene Cluster 55. Type = terpene. Location: 1361539 - 1382861 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 56 - Other

Gene cluster description

Gene Cluster 56. Type = other. Location: 2213650 - 2256950 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 57 - Ubia_cyclase-nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(ala-nrp-nrp-ala-nrp-nrp)
TRIVIDRAFT_62540
NRPSPredictor2 SVM: ala
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: gly
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: val
Stachelhaus code: ile
Minowa: leu
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: ala
Minowa: bmt
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 57. Type = UbiA_cyclase-nrps. Location: 2497486 - 2573890 nt. Click on genes for more information.
Show pHMM detection rules used
UbiA_cyclase: (UbiA_cyclase)
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 58 - T1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(mal)
TRIVIDRAFT_35498
PKS signature: mal
Minowa: mal
consensus: mal

Gene cluster description

Gene Cluster 58. Type = t1pks. Location: 583128 - 631750 nt. Click on genes for more information.
Show pHMM detection rules used
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 59 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (pk)
TRIVIDRAFT_217347
NRPSPredictor2 SVM: N/A
Stachelhaus code: N/A
Minowa: aeo
consensus: nrp

TRIVIDRAFT_62549
PKS signature: mal
Minowa: mxmal
consensus: pk

Database cross-links

Gene cluster description

Gene Cluster 59. Type = nrps-t1pks. Location: 1 - 41497 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 60 - Terpene

Gene cluster description

Gene Cluster 60. Type = terpene. Location: 114184 - 135656 nt. Click on genes for more information.
Show pHMM detection rules used
terpene: (Terpene_Synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or dmat or trichodiene_synth)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 61 - Other

Gene cluster description

Gene Cluster 61. Type = other. Location: 225005 - 268230 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters

Cluster 62 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(ala-nrp-nrp)
TRIVIDRAFT_85582
NRPSPredictor2 SVM: N/A
Stachelhaus code: ala
Minowa: ala
consensus: ala

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: pro
Minowa: ala
consensus: nrp

NRPSPredictor2 SVM: N/A
Stachelhaus code: gly
Minowa: ala
consensus: nrp

Database cross-links

Gene cluster description

Gene Cluster 62. Type = nrps. Location: 337960 - 392711 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters

Cluster 63 - Other

Gene cluster description

Gene Cluster 63. Type = other. Location: 2335360 - 2379137 nt. Click on genes for more information.
Show pHMM detection rules used
other: ((PP-binding & AMP-binding) or (PP-binding & A-OX) or (NAD_binding_4 & A-OX) or (NAD_binding_4 & AMP-binding) or LmbU or Neocarzinostat or cycdipepsynth or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Homologous gene clusters